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Time-Window Stratified Machine-Learning Risk Prediction Model for Diabetic Retinopathy and Cross-Cohort Study
Jingwen Hui, Zheya Han, Yuxi Bai, Yawen Gong, Quanhong Han, Xuehao Cui
Received November 1, 2025  Accepted December 18, 2025  Published online April 15, 2026  
DOI: https://doi.org/10.4093/dmj.2025.1098    [Epub ahead of print]
  • 1,551 View
  • 27 Download
AbstractAbstract PDFSupplementary MaterialPubReader   ePub   
Background
Diabetic retinopathy (DR) remains a significant cause of vision loss worldwide. Existing risk models rarely account for when DR develops relative to the onset of diabetes, even though early- and late-onset disease may have different clinical implications. We hypothesized that DR occurring within 6 years of diabetes diagnosis (short-term) represents an early-onset phenotype driven mainly by metabolic dysregulation and microvascular injury, whereas DR developing after 6 years (long-term) reflects late-onset disease shaped by cumulative metabolic burden and aging. This study aimed to develop and validate a time-window- stratified DR risk prediction model.
Methods
Data from two large cohorts (UK Biobank and Tianjin Eye Hospital) were analyzed, including 1,943 patients with diabetes but without DR at baseline. Separate Cox models were built for short-term (≤6 years) and long-term (>6 years) DR incidence. Feature selection used least absolute shrinkage and selection operator (LASSO) and Boruta algorithms, and model performance was assessed by area under the curve (AUC), calibration, and decision curve analyses. Machine-learning models were further developed on pooled data for multiclass classification (no DR, short-term DR, long-term DR) and interpretability using SHapley Additive exPlanations (SHAP) analysis.
Results
Both models identified glycosylated hemoglobin and retinal neurostructural measures (retinal nerve fiber layer thickness and retinal ganglion cell layer thickness) as consistent predictors, indicating that neuroretinal degeneration precedes clinical DR. The short-term model emphasized renal and lipid metabolism markers, whereas the long-term model highlighted age and uric acid. Internal validation and cross-cohort replication showed stable discrimination (AUC 0.79–0.84). The pooled XGBoost model improved accuracy (overall approximately 80%) with transparent interpretability.
Conclusion
Time-window-based modeling revealed distinct early- and late-onset DR risk profiles, thereby enhancing prediction precision. Integrating optical coherence tomography imaging with routine clinical variables offers a practical, interpretable framework for individualized risk assessment and early intervention in DR.
Complications
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Optimizing Early Detection of Diabetic Kidney Disease through Synergistic Biomarkers and Serum Metabolites in Humans
Xianke Zhou, Yuan Gui, Jia-Jun Liu, Shijia Liu, Dongning Liang, Yuanyuan Wang, Henry Wells Shaffer, Samantha Mae Mallari, Cameron Jones, Priya Gupta, Dier Li, Ke Zhang, Ying Yu, Jianling Tao, Yanlin Wang, Silvia Liu, Dong Zhou, Haiyan Fu
Diabetes Metab J. 2026;50(4):752-769.   Published online January 29, 2026
DOI: https://doi.org/10.4093/dmj.2025.0193
  • 3,270 View
  • 149 Download
  • 2 Web of Science
  • 2 Crossref
AbstractAbstract PDFSupplementary MaterialPubReader   ePub   
Background
Diabetic kidney disease (DKD) often progresses to end-stage renal disease more rapidly than nondiabetic kidney disease because of persistent hyperglycemia and early activation of multiple pathogenic pathways. Early detection of DKD is crucial for identifying subtle kidney damage before clinical symptoms appear.
Methods
This study combined human serum proteomics with public single-cell RNA sequencing and spatial transcriptomics data from diabetic kidneys to identify key biomarkers for DKD diagnosis. These biomarkers were validated in multiple organs of db/db mice at early and advanced stages. In a discovery cohort, sera from 173 healthy adults and 444 patients with type 2 diabetes mellitus (T2DM), with or without kidney disease, were analyzed using metabolomics and enzyme-linked immunosorbent assay (ELISA). Multiple machine learning algorithms were developed to integrate synergistic biomarkers and serum metabolites for early DKD detection, with results validated in 435 participants from four independent clinical cohorts.
Results
Metalloproteinase-7 (MMP-7) and tenascin C (TNC) were elevated in human diabetic kidneys at the single-cell and spatial levels. Proteomics indicated upregulation of serum amyloid A1 (SAA1) and TNC in the serum of patients with DKD. In db/db mice, all three biomarkers increased in multiple organs by 18 weeks of age. In sera from patients with DKD, MMP-7 and TNC levels were consistently elevated across cohorts. The new algorithms combining MMP-7, SAA1, and TNC enhanced early-stage DKD detection, with approximately 13% improvements in accuracy when serum metabolites were included to distinguish progression from early to advanced DKD stages.
Conclusion
Integrating synergistic biomarkers with serum metabolomics enhances the early detection of DKD, potentially improving outcomes by slowing disease progression in patients with T2DM.

Citations

Citations to this article as recorded by  
  • Recent advances in point-of-care colorimetric biosensors for detecting small molecule metabolites
    Zhiqiang Zhu, Zhun Gu, Xinxing Cao, Shanshan Zhang, Shao Su
    Chemical Communications.2026; 62(48): 12000.     CrossRef
  • Pathology-Anchored Biomarker Research Progress for the Early Diagnosis of Diabetic Kidney Disease: From Pathological Association to Early Validation
    Qiu Li, Mei Yang, Yingyu Luo, Nannan Zhang
    Biomedicines.2026; 14(7): 1643.     CrossRef
Basic and Translational Research
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Revealing VCAN as a Potential Common Diagnostic Biomarker of Renal Tubules and Glomerulus in Diabetic Kidney Disease Based on Machine Learning, Single-Cell Transcriptome Analysis and Mendelian Randomization
Li Jiang, Jie Jian, Xulin Sai, Xiai Wu
Diabetes Metab J. 2025;49(3):407-420.   Published online January 24, 2025
DOI: https://doi.org/10.4093/dmj.2024.0233
  • 9,982 View
  • 403 Download
  • 4 Web of Science
  • 4 Crossref
AbstractAbstract PDFSupplementary MaterialPubReader   ePub   
Background
Diabetic kidney disease (DKD) is recognized as a significant complication of diabetes mellitus and categorized into glomerular DKDs and tubular DKDs, each governed by distinct pathological mechanisms and biomarkers.
Methods
Through the identification of common features observed in glomerular and tubular lesions in DKD, numerous differentially expressed gene were identified by the machine learning, single-cell transcriptome and mendelian randomization.
Results
The diagnostic markers versican (VCAN) was identified, offering supplementary options for clinical diagnosis. VCAN significantly highly expressed in glomerular parietal epithelial cell and proximal convoluted tubular cell. It was mainly involved in the up-regulation of immune genes and infiltration of immune cells like mast cell. Mendelian randomization analysis confirmed that serum VCAN protein levels were a risky factor for DKD, while there was no reverse association. It exhibited the good diagnostic potential for estimated glomerular filtration rate and proteinuria in DKD.
Conclusion
VCAN showed the prospects into DKD pathology and clinical indicator.

Citations

Citations to this article as recorded by  
  • Transient versican expression is required for β1-integrin accumulation during podocyte layer morphogenesis in amphibian developing kidney
    Isabelle Buisson, Jean-François Riou, Muriel Umbhauer, Ronan Le Bouffant, Valérie Bello
    Cells & Development.2026; 185: 204062.     CrossRef
  • m6A Modified VCAN Promotes Glomerular Endothelial Cells Injury and Diabetic Nephropathy by SHH Pathway
    Jie Jiang, Jicheng Zhang, Chao Wang, Feng Wang
    Applied Biochemistry and Biotechnology.2026; 198(5): 3461.     CrossRef
  • Pathology-Anchored Biomarker Research Progress for the Early Diagnosis of Diabetic Kidney Disease: From Pathological Association to Early Validation
    Qiu Li, Mei Yang, Yingyu Luo, Nannan Zhang
    Biomedicines.2026; 14(7): 1643.     CrossRef
  • Multi-omics and machine learning identify FN1 and ALDH2 as diagnostic biomarkers and therapeutic targets in early and late diabetic kidney disease
    Jingwei Lin, Yingying Zheng, Diman Mai, Fuxiang Fang, Zhuokun Wei, Mengyu Liu, Trung Hieu Pham, Ming Li, Jiawen Zhao
    Renal Failure.2025;[Epub]     CrossRef
Review
Drug/Regimen
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Machine Learning Approach to Drug Treatment Strategy for Diabetes Care
Kazuya Fujihara, Hirohito Sone
Diabetes Metab J. 2023;47(3):325-332.   Published online January 12, 2023
DOI: https://doi.org/10.4093/dmj.2022.0349
  • 66,973 View
  • 410 Download
  • 14 Web of Science
  • 13 Crossref
AbstractAbstract PDFPubReader   ePub   
Globally, the number of people with diabetes mellitus has quadrupled in the past three decades, and approximately one in 11 adults worldwide have diabetes mellitus. Since both microvascular and macrovascular diseases in patients with diabetes predispose them to a lower quality of life as well as higher rates of mortality, managing blood glucose levels is of clinical relevance in diabetes care. Many classes of antihyperglycemic drugs are currently approved to treat hyperglycemia in patients with type 2 diabetes mellitus, with several new drugs having been developed during the last decade. Diabetes-related complications have been reduced substantially worldwide. Prioritization of therapeutic agents varies according to national guidelines. However, since the characteristics of participants in clinical trials differ from patients in actual clinical practice, it is difficult to apply the results of such trials to clinical practice. Machine learning approaches became highly topical issues in medicine along with rapid technological innovations in the fields of information and communication in the 1990s. However, adopting these technologies to support decision-making regarding drug treatment strategies for diabetes care has been slow. This review summarizes data from recent studies on the choice of drugs for type 2 diabetes mellitus focusing on machine learning approaches.

Citations

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  • Leveraging AI chatbots in supporting breast and ovarian cancer patients: A scoping review
    Vivian Hui, Lidan Tian, Xinyu Feng, Xiaoling Yuan, Janelle Yorke, Young Ji Lee
    DIGITAL HEALTH.2026;[Epub]     CrossRef
  • Digital biomarkers in chronic disease management: a systematic review of personalization and ethical challenges
    Shrivats Manikandan, Steiv Shore, Daniel Waszczuk, Sumitra Miriyala, Gayathri Sadanala
    Personalized Medicine.2026; 23(3): 275.     CrossRef
  • Improving Clinical Preparedness: Community Health Nurses and Early Hypoglycemia Prediction in Type 2 Diabetes Using Hybrid Machine Learning Techniques
    Sachin Ramnath Gaikwad, Mallikarjun Reddy Bontha, Seeta Devi, Dipali Dumbre
    Public Health Nursing.2025; 42(1): 286.     CrossRef
  • Empowerment in Type 2 diabetes: A patient-centred approach for lifestyle change
    Charlotte Björk Ingul, Siri Marte Hollekim-Strand, Mari Mørkeset Sandbakk, Torunn Ingfrid Grønseth, Tone Iren K. Rånes, Lars Tung Dyrendahl, Katarina Eilertsen, Stephan Kristensen, Turid Follestad, Bjarte Bye Løfaldli
    Diabetes Research and Clinical Practice.2025; 220: 111998.     CrossRef
  • Artificial intelligence to improve cardiovascular population health
    Benjamin Meder, Folkert W Asselbergs, Euan Ashley
    European Heart Journal.2025; 46(20): 1907.     CrossRef
  • Enhancing Antidiabetic Drug Selection Using Transformers: Machine-Learning Model Development
    Hisashi Kurasawa, Kayo Waki, Tomohisa Seki, Eri Nakahara, Akinori Fujino, Nagisa Shiomi, Hiroshi Nakashima, Kazuhiko Ohe
    JMIR Medical Informatics.2025; 13: e67748.     CrossRef
  • Machine learning algorithms to predict stroke in China based on causal inference of time series analysis
    Qizhi Zheng, Ayang Zhao, Xinzhu Wang, Yanhong Bai, Zikun Wang, Xiuying Wang, Xianzhang Zeng, Guanghui Dong
    BMC Neurology.2025;[Epub]     CrossRef
  • Investigation of insulinotropic mechanism of paracetamol: in silico followed by in vivo approaches for repurposing
    Majid Khan, Muhammad Usman Amin, Ashraf Ullah Khan, Sabi Ur Rehman, Safeer Khan
    Toxicological & Environmental Chemistry.2025; 107(7): 1547.     CrossRef
  • Artificial intelligence in glycemic management for diabetes: Applications, opportunities and challenges
    Zhen Ying, Xiaoying Li, Ying Chen
    Journal of Translational Internal Medicine.2025; 13(4): 314.     CrossRef
  • Documentation of social determinants of health for patients with type 2 diabetes in Epic Cosmos
    Polina V Kukhareva, Matthew J O’Brien, Daniel C Malone, Kensaku Kawamoto, Ramkiran Gouripeddi, Deepika Reddy, Mingyuan Zhang, Vikrant G Deshmukh, David Danks, Julio C Facelli
    JAMIA Open.2025;[Epub]     CrossRef
  • Exploring antioxidant activities and inhibitory effects against α‐amylase and α‐glucosidase of Elaeocarpus braceanus fruits: insights into mechanisms by molecular docking and molecular dynamics
    Hong Li, Yuanyue Zhang, Zhijia Liu, Chaofan Guo, Maurizio Battino, Shengbao Cai, Junjie Yi
    International Journal of Food Science & Technology.2024; 59(1): 343.     CrossRef
  • 3D Convolutional Neural Networks for Predicting Protein Structure for Improved Drug Recommendation
    Pokkuluri Kiran Sree, SSSN Usha Devi N
    EAI Endorsed Transactions on Pervasive Health and Technology.2024;[Epub]     CrossRef
  • Artificial Intelligence in Plastic Surgery: Advancements, Applications, and Future
    Tran Van Duong, Vu Pham Thao Vy, Truong Nguyen Khanh Hung
    Cosmetics.2024; 11(4): 109.     CrossRef
Original Article
Others
Development of Various Diabetes Prediction Models Using Machine Learning Techniques
Juyoung Shin, Jaewon Kim, Chanjung Lee, Joon Young Yoon, Seyeon Kim, Seungjae Song, Hun-Sung Kim
Diabetes Metab J. 2022;46(4):650-657.   Published online March 11, 2022
DOI: https://doi.org/10.4093/dmj.2021.0115
  • 14,374 View
  • 500 Download
  • 18 Web of Science
  • 15 Crossref
AbstractAbstract PDFSupplementary MaterialPubReader   ePub   
Background
There are many models for predicting diabetes mellitus (DM), but their clinical implication remains vague. Therefore, we aimed to create various DM prediction models using easily accessible health screening test parameters.
Methods
Two sets of variables were used to develop eight DM prediction models. One set comprised 62 easily accessible examination results of commonly used variables from a tertiary university hospital. The second set comprised 27 of the 62 variables included in the national routine health checkups. Gradient boosting and random forest algorithms were used to develop the models. Internal validation was performed using the stratified 10-fold cross-validation method.
Results
The area under the receiver operating characteristic curve (ROC-AUC) for the 62-variable DM model making 12-month predictions for subjects without diabetes was the largest (0.928) among those of the eight DM prediction models. The ROC-AUC dropped by more than 0.04 when training with the simplified 27-variable set but still showed fairly good performance with ROC-AUCs between 0.842 and 0.880. The accuracy was up to 11.5% higher (from 0.807 to 0.714) when fasting glucose was included.
Conclusion
We created easily applicable diabetes prediction models that deliver good performance using parameters commonly assessed during tertiary university hospital and national routine health checkups. We plan to perform prospective external validation, hoping that the developed DM prediction models will be widely used in clinical practice.

Citations

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  • Federated multimodal AI for precision-equitable diabetes care
    Bing Bai, Xilin Liu, Hong Li
    Frontiers in Digital Health.2026;[Epub]     CrossRef
  • An Explainable Transformer‐Based Model for Predicting Chronic Diseases Risk
    Nan Xu, Kaiyuan Zhang, Jiao Tian
    Concurrency and Computation: Practice and Experience.2026;[Epub]     CrossRef
  • Machine learning-driven risk prediction for post-hospitalization diabetes case management: Integrating clinical and social determinants of health
    Seung-Yup Lee, Mohammad Saleem, Andrew M. Land, Erin W. DeLaney, Alison R. Garretson, Mahee Patel, Allyson G. Hall, Salisa Westrick, Fernando Ovalle, Andrea L. Cherrington, Jane C. Banaszak-Holl
    International Journal of Medical Informatics.2026; 220: 106604.     CrossRef
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    Yukun Tao, Jinzheng Hou, Guangxin Zhou, Da Zhang
    Frontiers in Artificial Intelligence.2025;[Epub]     CrossRef
  • The Impact of Balancing Techniques and Feature Selection on Machine Learning Models for Diabetes Detection
    Vahid Sinap
    Fırat Üniversitesi Mühendislik Bilimleri Dergisi.2025; 37(1): 303.     CrossRef
  • Applications of Artificial Intelligence and Machine Learning in Prediabetes: A Scoping Review
    Benjamin Lalani, Rohan Herur, Daniel Zade, Grace Collins, Devin M. Dishong, Setu Mehta, Jalene Shim, Yllka Valdez, Nestoras Mathioudakis
    Journal of Diabetes Science and Technology.2025;[Epub]     CrossRef
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    Hye Ah Lee, Hyesook Park, Young Sun Hong
    Journal of Korean Medical Science.2024;[Epub]     CrossRef
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    Rishita Konda, Anuraag Ramineni, Jayashree J, Niharika Singavajhala, Sai Akshaj Vanka
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    Ying-Qiang Liu, Tzu-Wei Chang, Lung-Chun Lee, Chia-Yu Chen, Pi-Shan Hsu, Yu-Tse Tsan, Chao-Tung Yang, Wei-Min Chu
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    Juyoung Shin, Joonyub Lee, Taehoon Ko, Kanghyuck Lee, Yera Choi, Hun-Sung Kim
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